Job descriptionThis PhD project is a unique chance to contribute to solutions of the big health care dementia problem with advanced computational methods, supervised by experts in the field of dementia (prof. dr. Marcel Olde Rikkert), epidemiology (dr. René Melis), and multiscale modeling (prof. dr. ir. Alfons Hoekstra).
When you are genuinely motivated to study dementia with your broad scientific skills and interests, are attracted by puzzling data science problems, and eager to work on how to apply multiscale modeling to the challenges of complex diseases such as dementia, you are the dreamed PhD student.
Next, you should be excited on working in a really interdisciplinary setting, formed by the Radboudumc Alzheimer Centre (located within the Donders Center for Medical Neurosciences), the Radboud University's data science group, and the Institute for Advanced Studies (IAS) in Amsterdam, which together will conduct the studies. The PhD project should result in four high quality scientific papers, and a thesis defense within four years, as part of the Donders Institute graduate school.
Project aimThe failure of over 400 clinical trials to modify Alzheimer's Disease (AD) based on beta-amyloid and tau protein pathways urgently asks for alternative scientific reasoning. We will use the
GAAIN platform and the IALSA/ Rotterdam study data for a multiscale modeling approach on potential protective factors for AD.
This multiscale modeling should help us to explain to understand why individuals with similar brain damage and similar neuronal loss due to Alzheimer´s disease and aging can show a very heterogeneous level of cognitive abilities and a heterogeneous course of disease, probably for a major part explained by differences in lifestyle factors (e.g. sleep) and cognitive and social activities in which the persons are involved.
Research projectWe will start defining dementia (including AD) as a complex disease caused by many interacting bio-social interactions. Existing data will be used (possibly also new analysed) to describe differences in Alzheimer patients, and dementia patients in general, with slow and rapid decline. We want to apply agent based modeling techniques to study interactions of the agents active in dementia trajectories at four interacting scale levels: the cellular (e.g beta-amyloid burden), organ (e.g. functional networks), organism (e.g. sleep), and social scale (e.g. social activity). In these model individual and group data can be applied to simulate what will happen with AD risk factors and individual behavior over time.
Calibration, validation and replication will be consecutive steps to be carried out and published.
By using new multiscale modeling techniques the PhD will apply iterative steps of programming, model calibration and refinement to build the first multiscale model for dementia in old age. Together with studying data and existing literature also consensus rounds among experts (i.e. group based modeling) will be used to develop more and more detailed causal loop diagrams connecting the risk, resilience and resistance factors for Alzheimer's disease.