PhD candidate ‘Repeat-expanded RNA in myotonic dystrophy'

PhD candidate ‘Repeat-expanded RNA in myotonic dystrophy'

Published Deadline Location
6 Jul 5 Aug Nijmegen

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Job description

Myotonic dystrophy type 1 (DM1) is the most common inheritable form of muscular dystrophy in adults. Its constellation of symptoms is caused by an expanded (CTG)n repeat in the DMPK gene. There is no cure for DM1 yet, but it is generally accepted that repeat-expanded DMPK RNA is the prime therapeutic target. For the design of effective treatment strategies our understanding of RNA toxicity in DM1 needs refinement. For example, what exactly determines the toxicity of expanded DMPK transcripts? And to which extent must the transcripts of the disease allele be reduced to alleviate symptoms at the cellular level? Hence, we need to identify the contribution of distinct features of expanded DMPK transcripts to RNA toxicity in DM1.

We will apply the CRISPR/Cas9 toolbox to generate muscle cell lines that express expanded DMPK RNAs at different expression levels, with different (CUG)n repeat lengths, and with variable nuclear residence time. We will grow these cells in a biomimetic culture system, approaching the surrounding stimuli of skeletal muscle in patients, to optimize translation of our findings to clinical practice. Cells will be studied under resting, proliferating and differentiating conditions, on different flexible substrates and protein coatings, and under mechanical stimulation to simulate muscle contraction. We thus aim to demonstrate the relevance of separate features of expanded RNA in DM1, which will ultimately help in tailoring drug strategies (e.g., antisense oligonucleotides) to neutralize RNA toxicity.

This project combines complementary expertise from the Myotonic Dystrophy group (Cell Biology) and the Biomaterials group (Dentistry) of the Radboud university medical center.This 4-year-project is funded by the Prinses Beatrix Spierfonds.

Specifications

Radboud University Medical Center (Radboudumc)

Requirements

  • Master's degree (or equivalent) in the field of molecular life sciences and a strong interest in neuromuscular disease and advanced cell (organoid) culture;
  • Background in molecular cell biology;
  • Experience in molecular and cellular techniques, cell culture and microscopy;
  • Motivation, initiative and ambition to publish in high-impact journals;
  • Able to work both independently and in multidisciplinary teams at separate locations;
  • Excellent communication skills, contributing to a pleasant working atmosphere;
  • High level of proficiency in English; basic knowledge of or willingness to learn Dutch.

Conditions of employment

Expected start date is September-November 2018.

Upon commencement of employment we require a certificate of conduct (Verklaring Omtrent het Gedrag, VOG) and there will be a screening based on the provided CV. Radboud university medical center's HR Department will apply for this certificate on your behalf.

Read more about the Radboudumc employment conditions and what our International Office can do for you when moving to the Netherlands.

Employer

Radboudumc

This research project will be conducted in the Myotonic Dystrophy group of the Department of Cell Biology in collaboration with the Biomaterials group at the Department of Dentistry of the Radboud University Medical Centre, Nijmegen, The Netherlands. The candidate will join the PhD program of the Radboud Institute for Molecular Life Sciences (RIMLS).

Radboudumc
Radboudumc strives to be a leading developer of sustainable, innovative and affordable healthcare to improve the health and wellbeing of people and society in the Netherlands and beyond. This is the core of our mission: To have a significant impact on healthcare. To get a better picture of what this entails, check out our strategy.

Read more about what it means to work at Radboudumc and how you can do your part.

Specifications

  • PhD
  • Health
  • max. 36 hours per week
  • €2279—€2919 per month
  • University graduate
  • 88588-P397198-1

Employer

Radboud University Medical Center (Radboudumc)

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Location

Geert Grooteplein-Zuid 10, 6525 GA, Nijmegen

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