PhD student 'Systems Dynamics Multi Scale Modeling Approach of Alzheimer’s disease'

PhD student 'Systems Dynamics Multi Scale Modeling Approach of Alzheimer’s disease'

Published Deadline Location
17 May 8 Jun Nijmegen

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This PhD project is a unique chance for the brightest computational science students who really want to have impact on brain health and health care with their modeling skills.

Job description

Background
Scientific reasoning on dementia in old age was dominated by the Amyloid Cascade hypothesis for Alzheimer’s disease over the last decades. However, over the last 20 years more than 200 therapeutic trials based on this hypothesis, blocking beta-amaloid at several points in this linear pathway, failed to show a positive therapeutic effect. On the other side, improvement of multiple lifestyle conditions (cardiovascular risk modification, improved education, healthier nutrition, more exercise, better working conditions) convincingly resulted in lowering of the dementia incidence with 20-45% in five large studies across Western countries (USA, UK, Spain, Sweden, Netherlands) over the last 30 years. These very surprising results in an era with rapidly increasing genetic, metabolomic, and proteomic knowledge on dementia, but without a sight of a cure or solution underlines the high complexity of dementia in old age.
To deliver new insights in dementia we will start a PhD project on using multiscale computational modeling methodology to improve our understanding of the highly heterogeneous dementia trajectories in older subjects, taking into account data on cellular processes, but also multimorbidity, functional performances, environmental and social circumstances. This PhD project will importantly contribute to the evidence base of a new dementia paradigm based on the concept of complexity science applied to the mechanisms of (accelerated) brain aging.
 
Research project
Taking into account the complexity of the dementia pathophysiology the PhD candidate will start using data from literature, available databases and consensus meetings on the pathophysiology of dementia / Alzheimer in old age, and apply these with a multiscale systems dynamics modeling approach. We want to start from single scale models on the amyloid cascade, and connect these to linked single scale models on 2. Multimorbidity, 3. Social activity/Lifestyle, and 4. Environmental  processes for which we use data on the phenotype and course of  dementia in older adults. These models will be used for simulations in comparison to the real life data known from large follow-up studies to quantify the predictive power / uncertainty in the multiscale-models we developed, and refine these.                

Specifications

Radboud University Medical Center (Radboudumc)

Requirements

Requirements

  • Master’s degree computational sciences, or comparable, with biological or medical applications
  • Passion for developing and testing mathematical multiscale models, and motivated to apply these as predictors of dementia trajectories in old age
  • Affinity with, and if possible experience in clinical research
  • Well-developed social skills and team-spirit: strong ability to connect with other research groups
  • Skilled in writing academic English, best if evidenced by having published a scientific article(s)


The PhD candidate selected is ambitious and passionate to meet our scientific modeling ideal of dementia, and also connects with our global health improvement goals, enjoys working on the project deliverables, at the same time develops him/herself by acquiring new (research) skills, thereby growing to an excellent researcher with a generic perspective and innovative methodological competencies.           

This PhD project is a unique chance for the brightest computational science students who really want to have impact on brain health and health care with their modeling skills. As dementia currently is the most threatening problem for older persons, and a therapy is still lacking, we look for groundbreaking new models to improve our understanding of dementia. When you are genuinely intrigued by the possibility to study human physiology with your computational science skills, and want to connect your multiscale modeling to the science of complex biological systems and their interaction with the environment, you have an important characteristic of our dreamed PhD student. Next, you should be excited on working on large datasets, and also carry out model validation in the multidisciplinary Radboudumc Alzheimer Centre Research group, who have chosen the ‘complexity theme’ as their connecting focus of interest.     

Conditions of employment

Fixed-term contract: 4 years.

Conditions of employment

  • Scale 10A: max. € 40116 gross income per year at full employment (incl. vacation bonus and end of year payments)
  • The project will appoint a PhD candidate for 4 years in total. Your performance will be evaluated after 1 years according to the Donders PhD track. If the evaluation is positive, the contract will be extended by another 3 years. You will be ranked in the Dutch university job-ranking system (UFO) as a PhD-student (promovendus).
  • Upon commencement of employment we require a certificate of conduct (Verklaring Omtrent het Gedrag, VOG). Radboud university medical center’s HR Department will apply for this certificate on your behalf.
     

Employer

Radboudumc (university medical center)

The Radboudumc center advances human knowledge by conducting biomedical, translational and clinical research in order to improve wellbeing.

Our key strength is medical life-sciences and clinical practice, with an impressive infrastructure comprising state-of-the-art technology platforms and (translational) research facilities. The Radboudumc is therefore uniquely positioned in the emerging Euregio and Dutch healthcare infrastructure to play a leading role in the new healthcare paradigm of prediction, prevention and personalised medicine.

The Radboudumc focuses on scientific health challenges of today, with an eye on emerging diseases of the future.

Our mission: ‘to have a significant impact on healthcare’.

Department

Radboudumc advances knowledge by conducting biomedical, translational and clinical research in order to improve wellbeing. Our key strength is medical life-sciences and clinical practice, with an impressive infrastructure comprising state-of-the-art technology platforms and (translational) research facilities.

Radboudumc is therefore uniquely positioned in the emerging Euregio and Dutch healthcare infrastructure to play a leading role in the new healthcare paradigm of prediction, prevention and personalised medicine.

The project will be positioned at the Department of Geriatrics and the Alzheimer Research theme (one of the formally selected research themes of the Radboudumc), which is part of the Donders Research Institute for Cognitive and Medical NeuroSciences. The project will be closely connected to the internationally highly recognized scientific work on medical multiscale modeling from the scientific group of Prof. Alfons Hoekstra and Prof. Peter Sloot, at the Computational Science Lab, University of Amsterdam. This connection of a geriatric medicine group to this computational science group is a characteristic of the wide scope of the project. The PhD student will primarily carry out the work at the research group of the Department of Geriatric Medicine, but will also get inspiration and collaboration from scientists working at the Donders Institute of Cognitive and Medical Neurosciences. The PhD student will be challenged to connect this research to international databases, and thus should also be interested in working abroad, when necessary.

Specifications

  • PhD
  • Natural sciences; Health
  • max. 36 hours per week
  • University graduate

Employer

Radboud University Medical Center (Radboudumc)

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Location

Geert Grooteplein-Zuid 10, 6525 GA, Nijmegen

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